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Thermodynamic parameters obtained for the formation of the Cas12a-RNA/DNA complex. Baranova S.V., Zhdanova P.V., Golyshev V.M., Lomzov A.A., Pestryakov P.E., Chernonosov A.A., Koval V.V. Biochem. and Biophys.Res. Com. 2025. V. 743. DOI: P. 151176. 10.1016/j.bbrc.2024.151176
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Position-dependent effect of AP sites within an hTERT promoter G-quadruplex scaffold on quadruplex stability and repair activity of the APE1 enzyme. Savitskaya V.Y., Novoselov K.A., Dolinnaya N.G., Monakhova M.V., Snyga V.G., Diatlova E., Peskovatskova E.S., Golyshev V.M., Kitaeva M.I., Eroshenko D.A., Zvereva M.I., Zharkov D.O., Kubareva E.A. Int. J. Mol. Sci. 2025. V. 26. N 1. P. 337. DOI: 10.3390/ijms26010337
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Cold Atmospheric Plasma Jet and Conjugates of Gold Nanoparticles with Tyrp1 Antibodies Efficiently Suppress Growth of B16 Tumor. Biryukov M.M., Schweigert I., Polyakova A.A., Kryackova N.V., Varlamov M., Gorbunova E.A., Epanchintseva A.V., Pyshnaya I.A., Zakrevsky D., Milakhina E., Wang R., Koval O.A. Plasma Medicine. 2025. V. 15. N 1. P. 1-16. DOI: 10.1615/PlasmaMed.2025057895
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first_pagesettingsOrder Article Reprints Open AccessArticle Synthesis of Magnetic Nanoparticles Coated with Human Serum Albumin and Loaded by Doxorubicin. Petrov K.D., Ryabova E.S., Dmitrienko E.V., Chubarov A.S. Magnetochemistry. 2025. V. 11. N 2. P. 13. DOI: 10.3390/magnetochemistry11020013
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Synthesis and Physicochemical Properties of New Phosphoramide Oligodeoxyribonucleotides. I. N-Caffeine Derivatives. Novgorodceva A.I., Vorob’ev, A.Y., Lomzov A.A., Vasilyeva S.V. Bioorg. Chem. 2025. V. 157. P. 108313. DOI: 10.1016/j.bioorg.2025.108313
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Pulsed voltage cold atmospheric plasma jet and gold nanoparticles enhance cytotoxic anticancer effects. Schweigert I.V., Biryukov M.M., Polyakova A.A., Gorbunova E.A., Epanchintseva A.V., Pyshnaya I.A., Zakrevsky D., Milakhina E., Koval O.A. J. Phys. D: Appl. Phys. 2024. V. 57. N. 25. P. 255205. DOI: 10.1088/1361-6463/ad34df
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Diversity of self-assembled RNA complexes: from nanoarchitecture to nanomachines. Kanarskaya M.A., Pyshnyi D.V., Lomzov A.A. Molecules. 2024. V. 29. N 1. P. 10. DOI: 10.3390/molecules29010010
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Properties of phosphoramide benzoazole oligonucleotides (PABAOs). I. Structure and hybridization efficiency of N-benzimidazole derivatives. Golyshev V.M., Yushin I.I., Gulyaeva O.A., Baranovskaya E.E., Lomzov A.A. Biochem. and Biophys.Res. Com. 2024. V. 693. P. 149390. DOI: 10.1016/j.bbrc.2023.149390
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Phosphoramidate Azole Oligonucleotides for Single Nucleotide Polymorphism Detection by PCR. Chubarov A.S., Baranovskaya E.E., Oscorbin I.P., Yushin I.I., Filipenko M.L., Pyshnyi D.V., Vasilyeva S.V., Lomzov A.A. Int. J. Mol. Sci. 2024. V. 25. N 1. P. 617. DOI: 10.3390/ijms25010617
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The Role of Key Amino Acids of the Human Fe(II)/2OG-Dependent Dioxygenase ALKBH3 in Structural Dynamics and Repair Activity toward Methylated DNA. Kanazhevskaya L.Y., Gorbunov A.A., Lukina M.V., Smyshliaev D.A., Zhdanova P.V., Lomzov A.A., Koval V.V. Int. J. Mol. Sci. 2024. V. 25. P. 1145. DOI: 10.3390/ ijms25021145
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Characterizing Aptamer Interaction with the Oncolytic Virus VV-GMCSF-Lact. Dymova M.A., Malysheva D.O., Popova V.K., Dmitrienko E.V., Endutkin A.V., Drokov D.V., Mukhanov V.S., Byvakina A.A., Kochneva G.V., Artyushenko P.V., Shchugoreva I.A., Rogova A.V., Tomilin F.N., Kichkailo A.S., Richter V.A., Kuligina E.V. Molecules. 2024. V. 29. P. 848. DOI: 10.3390/molecules29040848
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Contrast Agents Based on Human Serum Albumin and Nitroxides for 1H-MRI and Overhauser-enhanced MRI. Mitin D.E., Bullinger F., Dobrynin S., Engelmann J., Scheffler K., Kolokolov M., Krumkacheva O., Buckenmaier L., Kirilyuk I., Chubarov A.S. Int. J. Mol. Sci. 2024. V. 25. N 7. P. 4041. DOI: 10.3390/ijms25074041
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Pulsed Dipolar EPR for Self-Limited Complexes of Oligonucleotides Studies. Chubarov A.S., Endeward B., Kanarskaya M.A., Polienko Y.F., Prisner T., Lomzov A.A. Biomolecules. 2024. V. 14. N 8. P. 887. DOI: 10.3390/biom14080887
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Аберрантная репарация 8-оксогуанина в коротких выпетливаниях ДНК. Ерошенко Д.А., Дятлова Е.А., Голышев В.М., Ендуткин А.В., Жарков Д.О. Доклады Академии Наук (науки о жизни). 2024. т. 515. № 2. С. 14–18. DOI: 10.31857/S2686738924020031
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Aberrant repair of 8-oxoguanine in short DNA bulges. Eroshenko D.A., Diatlova E., Golyshev V.M., Endutkin A.V., Zharkov D.O. Доклады Академии Наук (науки о жизни). 2024. V. 513. Suppl. 1. P. S82–S86. DOI: 10.1134/S1607672923600355 перевод
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Synthesis and Properties of α-Phosphate-Modified Nucleoside Triphosphates. Novgorodceva A.I., Lomzov A.A., Vasilyeva S.V. Molecules. 2024. V. 29. N 17. P. 4121. DOI: 10.3390/molecules29174121
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Error-Prone DNA Synthesis on Click-Ligated Templates. Endutkin A.V., Yakovlev A.V., Zharkov T.D., Golyshev V.M., Yudkina A.V., Zharkov D.O. Doklady Biochemistry and Biophysics. 2024. P. 1-6. DOI: 10.1134/s1607672924600416 перевод
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Синтетические повреждения с флуоресцеинкарбамоильной группировкой как аналоги объемных повреждений, удаляемых системой эксцизионной репарации нуклеотидов. Сравнительное исследование свойств. Попов А.А., Голышев В.М., Королева Л.С., Назаров К.Д., Анарбаев Р.О., Петрусева И.О. Acta Naturae. 2024. Т. 16. № 3(62). С. 74-82. DOI: 10.32607/actanaturae.27419
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Synthetic Lesions with a Fluorescein Carbamoyl Group As Analogs of Bulky Lesions Removable by Nucleotide Excision Repair: A Comparative Stady on Properties. Popov A.A., Golyshev V.M., Koroleva L.S., Nazarov K.D., Anarbayev R.O., Petruseva I.O. Acta Naturae. 2024. V.16. N3 (62). P. 74-82. DOI: 10.32607/actanaturae.27419 перевод
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Высокоошибочный синтез ДНК на клик-лигированных матрицах. Ендуткин А.В., Яковлев А.О., Жарков Т.Д., Голышев В.М., Юдкина А.В., Жарков Д.О. Доклады Академии Наук (науки о жизни). 2024. Т. 518. № 5. С. 101–107. DOI: 10.31857/S2686738924050186
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An Approach to Identifying Single-Nucleotide Mutations Using Noncovalent Associates of Gold Nanoparticles with Fluorescently Labeled Oligonucleotides. Epanchintseva A.V., Gorbunova E.A., Nekrasov M.D., Poletaeva Y., Pyshnaya I.A. Int. J. Mol. Sci. 2024. V. 25. P. 13230. DOI: 10.3390/ijms252413230
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Адаптация протокола автоматического твердофазного фосфитамидного синтеза олигодезоксирибонуклеотидов для получения их N-незамещенных амидофосфатных аналогов (P-NH2). Малова Е.А., Пышная И.А., Мещанинова М.И., Пышный Д.В. Биоорганическая химия. 2024. № 6. С. 788-804. DOI: 10.31857/S0132342324060065
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Hybrid RNA/DNA Concatemers and Self-Limited Complexes: Structure and Prospects for Therapeutic Applications. Kanarskaya M.A., Novikova S.V., Lomzov A.A. Molecules. 2024. V. 29. N 24. P. 5896. DOI: 10.3390/molecules29245896
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The Role of Key Amino Acids of the Human Fe(II)/2OG-Dependent Dioxygenase ALKBH3 in Structural Dynamics and Repair Activity toward Methylated DNA. Kanazhevskaya L.Y., Gorbunov A.A., Lukina M.V., Smyshliaev D.A., Zhdanova P.V., Lomzov A.A., Koval V.V. Int. J. Mol. Sci. 2024. V. 25. N 2. P. 1145. DOI: 10.3390/ijms25021145
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Optimization of Automatic Synthesis of Benzoxazole Phosphoramidate Oligonucleotides. Baranovskaya E.E., Poddubnyakova S.A., Lomzov A.A., Vasilyeva S.V. Journal of Siberian Federal University. Mathematics & Physics. 2024. V. 17. N 6. P. 776–782.
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Adaptation of the Protocol of the Automated Solid-Phase Phosphoramidite Synthesis of Oligodeoxyribonucleotides for Preparing Their N-Unsubstituted Phosphoramidate Analogs (P–NH2). Malova E.A., Pyshnaya I.A., Meschaninova M.I., Pyshnyi D.V. Russ. J. Bioorganic Chem. 2024. V. 50. P. 2455–2472. DOI: 10.1134/S106816202406027X перевод
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Enhancement of the Anticancer Effect during the Simultaneous Treatment of Cells by a Cold Atmospheric Plasma Jet and Gold Nanoparticles. Schweigert I.V., Zakrevsky D., Milakhina E., Gugin P., Biryukov M.M., Polyakova A.A., Kryachkova N., Gorbunova E.A., Epanchintseva A.V., Pyshnaya I.A., Koval O.A. Физика плазмы. 2024. V. 50. N 11. P. 1375–1387. DOI: 10.1134/S1063780X24601597 перевод
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Properties of phosphoramide benzoazole oligonucleotides (PABAOs). II. Structure and hybridization efficiency of N-benzoxazole derivatives. Yushin I.I., Golyshev V.M., Novgorodceva A.I., Lomzov A.A. Biochem. and Biophys.Res. Com. 2024. V. 740. P. 150997. DOI: 10.1016/j.bbrc.2024.150997
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All Domains of SARS-CoV-2 nsp1 Determine Translational Shutoff and Cytotoxicity of the Protein. Frolov I., Agback T., Palchevska O., Dominguez F., Lomzov A.A., Agback P., Frolova E.I. Journal of Virology. 2023. e0186522. DOI: 10.1128/jvi.01865-22
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Allele-Specific PCR for PIK3CA Mutation Detection Using Phosphoryl Guanidine Modified Primers. Chubarov A.S., Oskorbin I.P., Novikova L.M., Filipenko M.L., Lomzov A.A., Pyshnyi D.V. Diagnostics. 2023. V. 13. N 2. P. 250. DOI: 10.3390/diagnostics13020250
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Magnetic Nanocomposites and Imprinted Polymers for Biomedical Applications of Nucleic Acids. Popova V.K., Dmitrienko E.V., Chubarov A.S. Magnetochemistry. 2023. V. 9. N 1. P. 12. DOI: 10.3390/magnetochemistry9010012
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Высокоёмкие частицы карбоната кальция как основа для рН-чувствительных контейнеров для доксорубицина. Паллаева Т.Н., Михеев А.В., ХмелениН Д.Н., Еуров Д.А., Курдюков Д.А., Попова В.К., Дмитриенко Е.В., Трушина Д.Б. Кристаллография. 2023. Т. 68. № 2. С. 298-305. DOI: 10.31857/S0023476123020121
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Synthesis of Oligonucleotides Carrying Inter-nucleotide N‑(Benzoazole)-phosphoramide Moieties. Vasilyeva S.V., Baranovskaya E.E., Dyudeeva E., Lomzov A.A., Pyshnyi D.V. ACS Omega. 2023. V. 8. N 1. P. 1556−1566. DOI: 10.1021/acsomega.2c07083
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Effect of Sterilization Methods on Electrospun Scaffolds Produced from Blend of Polyurethane with Gelatin. Chernonosova V.S., Kuzmin I.E., Shundrina I.K., Korobeynikov M.V., Golyshev V.M., Chelobanov B.P., Laktionov P.P. Journal of Functional Biomaterials. 2023. V. 14. N 2. P. 70. DOI: 10.3390/jfb14020070
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Solution pH Effect on Drain-Gate Characteristics of SOI FET Biosensor. Bulgakova A.E., Berdyugin A.A., Naumova O., Fomin B., Pyshnyi D.V., Chubarov A.S., Dmitrienko E.V., Lomzov A.A. Electronics. 2023. V. 12. N 3. P. 777. DOI: 10.3390/electronics12030777
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Doxorubicin-Loaded Silica Nanocomposites for Cancer Treatment. Popova V.K., Poletaeva Y., Chubarov A.S., Pyshnyi D.V., Dmitrienko E.V. Coatings. 2023. V. 13. N 2. C. 324. DOI: 10.3390/coatings13020324
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Fluorinated Human Serum Albumin as Potential 19F Magnetic Resonance Imaging Probe. Mitin D.E., Chubarov A.S. Molecules. 2023. V. 28. N 4. P. 1695. DOI: 10.3390/molecules28041695
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pH-Responsible Doxorubicin-Loaded Fe3O4@CaCO3 Nanocomposites for Cancer Treatment. Popova V.K., Poletaeva Y., Chubarov A.S., Dmitrienko E.V. Pharmaceutics. 2023. V. 15. N 3. P. 771. DOI: 10.3390/pharmaceutics15030771
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Nylon-6-Coated Doxorubicin-Loaded Magnetic Nanoparticles and Nanocapsules for Cancer Treatment. Bobrikova E.N., Poletaeva Y., Zheng Y, Chubarov A.S., Dmitrienko E.V. Magnetochemistry. 2023. V. 9. N 4. P. 106. DOI: 10.3390/magnetochemistry9040106
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Long non-coding RNA DINO promotes cisplatin sensitivity in lung adenocarcinoma via the p53-Bax axis. Liu Z., Wang O., Chubarov A.S., Li Y., Yang X., Dmitrienko E.V., Zheng Y. J Thorac Dis. 2023. V. 15. N 4. P. 2198-2212. DOI: 10.21037/jtd-23-465
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Novel TDP1 Inhibitors: Disubstituted Thiazolidine-2,4-Diones Containing Monoterpene Moieties. Ivankin D.I., Kornienko T.E., Mikhailova M.A., Dyrkheeva N.S., Zakharenko A.L., Achara C., Reynisson J., Golyshev V.M., Luzina O.A., Volcho К.P., Salakhutdinov N.F., Lavrik O.I. Int. J. Mol. Sci. 2023. V. 24. N 4. P. 3834. DOI: 10.3390/ijms24043834
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Комплексы и высокомолекулярные ассоциаты додецил-содержащих олигонуклеотидов с сывороточным альбумином. Павлова А.С., Илющенко В.В., Купрюшкин М.С., Жарков Т.Д., Дюдеева Е.С., Бауэр И.А., Чубаров А.С., Пышный Д.В., Пышная И.А. Биохимия. 2023. V. 88. N 8. С. 1423 – 1440. DOI: 10.31857/S0320972523080109
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Revealing Light-Induced Structural Shifts in G-QuadruplexPorphyrin Complexes: A Pulsed Dipolar EPR Study. Sannikova N., Kolokolov M.I., Khlynova T.A., Chubarov A.S., Polienko Y., Fedin M., Krumkacheva O. Phys. Chem. Chem. Phys. 2023. V. 25. N 33. P. 22455-22466. DOI: 10.1039/d3cp01775c
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Noncovalent Adsorption of Single-Stranded and Double-Stranded DNA on the Surface of Gold Nanoparticles. Gorbunova E.A., Epanchintseva A.V., Pyshnyi D.V., Pyshnaya I.A. Applied Sciences (Basel). 2023. V. 13. P. 7324. DOI: 10.3390/app13127324
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PARP3 Affects Nucleosome Compaction Regulation. Ukraintsev A.A., Kutuzov M.M., Belousova E.A., Joyeau M., Golyshev V.M., Lomzov A.A., Lavrik O.I. Int. J. Mol. Sci. 2023. V. 24. N 10. P. 9042. DOI: 10.3390/ijms24109042
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Effects of Bis(imino)acenaphthene (Bian)-Derived Ligands on the Cytotoxicity, DNA Interactions, and Redox Activity of Palladium(II) Bipyridine Complexes. Komlyagina V.I., Romashev N.F., Besprozvannykh V.K., Arakelyan J., Wu C., Chubarov A.S., Bakaev I.V., Soh Y.K., Abramov P.A., Cheung K.L., Kompankov N.B., Ryadun A., Babak M.V., Gushchin A.L. Inorganic Chemistry. 2023. V. 62. P. 11541−11553. DOI: 10.1021/acs.inorgchem.3c01172
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Preparation of Magnetic Molecularly Imprinted Polymer for Methylene Blue Capture. Sedelnikova A.Y., Poletaeva Y., Golyshev V.M., Chubarov A.S., Dmitrienko E.V. Magnetochemistry. 2023. V. 9. P. 196. DOI: 10.3390/magnetochemistry9080196
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19F electron nuclear double resonance (ENDOR) spectroscopy for distance measurements using trityl spin labels in DNA duplexes. Asanbaeva N.B., Novopashina D.S., Rogozhnikova O.Yu., Tormyshev V.M., Kehl A., Sukhanov A., Shernyukov A.V., Genaev A., Lomzov A.A., Bennati M., Meyerde A., Bagryanskaya E.G. Phys. Chem. Chem. Phys. 2023. V. 25. P. 23454–23466. DOI: 10.1039/d3cp02969g
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Complexes and Supramolecular Associates of Dodecyl-Containing Oligonucleotides with Serum Albumin. Pavlova A.S., Iliusenko V.V., Kupryushkin M.S., Zharkov T.D., Dyudeeva E., Bauer I.A., Chubarov A.S., Pyshnyi D.V., Pyshnaya I.A. Biochemistry (Moscow). 2023. V. 88. P. 1165-1180. DOI: 10.1134/S0006297923080102
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Combined NMR and molecular dynamics conformational filter identifies unambiguously dynamic ensembles of Dengue protease NS2B/NS3pro. Agback T., Lesovoy D., Han X., Lomzov A.A., Sun R., Sandalova T., Orekhov V.Yu., Achour A., Agback P. Commun Biol. 2023. V. 6. N 1. P. 1193. DOI: 10.1038/s42003-023-05584-6
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Высокочувствительный биосенсор для безметочной детекции биомаркеров. Булгакова А.Е., Ломзов А.А., Дмитриенко Е.В., Пышный Д.В. Наука и технологии Сибири. 2023. № 8. С. 118-121.
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Application of the weighted histogram method for calculating the thermodynamic parameters of the formation of oligodeoxyribonucleotide duplexes. Yushin I.I., Golyshev V.M., Pyshnyi D.V., Lomzov A.A. Вавиловский журнал генетики и селекции. 2023. V. 27. N 7. P. 807-814. 10.18699/VJGB-23-93. перевод
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Self-Penetrating Oligonucleotide Derivatives: Features of Self-Assembly and Interactions with Serum and Intracellular Proteins. Bauer I.A., Ilina E.S., Zharkov T.D., Grigoryeva E.V., Chinak O.A., Kupryushkin M.S., Golyshev V.M., Mitin D.E., Chubarov A.S., Khodyreva S.N., Dmitrienko E.V. Pharmaceutics. 2023. V. 15. N 12. P. 2779. DOI: 10.3390/pharmaceutics15122779
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High-Capacity Calcium Carbonate Particles As pH-Sensitive Containers for Doxorubicin. Bоrodina T.N., Mikheev A., Khmelenin A., Eurov D.A., Kurdyukov D.A., Popova V.K., Dmitrienko E.V., Trushina D.B. Кристаллография. 2023. V. 68. N 2. P. 309–315. DOI: 10.1134/s1063774523020128 перевод
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Применение метода взвешенных гистограмм для расчета термодинамических параметров формирования комплексов олигодезоксирибонуклеотидов. Юшин И.И., Голышев В.М., Пышный Д.В., Ломзов А.А. Вавиловский журнал генетики и селекции. 2023. Т. 27. № 7. С. 807-814. DOI: 10.18699/VJGB-23-93